Fstat                package:Geneland                R Documentation

_F _s_t_a_t_i_s_t_i_c_s

_D_e_s_c_r_i_p_t_i_o_n:

     Computes F statistics according to Weir and Cockerham's 
     estimators.

_U_s_a_g_e:

     Fstat(genotypes,allele.numbers, path.mcmc)

_A_r_g_u_m_e_n_t_s:

genotypes: Genotypes of individuals. A matrix with one line per
          individual and 2 columns per locus

allele.numbers: A vector of integer containing the number of possible
          allele for each locus

path.mcmc: Path to output files directory 

_V_a_l_u_e:

     A list with components  

Total.Fit : A real number estimating the total Fit

Pairwise.Fis : A matrix of real numbers estimating the pairwise Fis

Pairwise.Fst : A matrix of real numbers estimating the pairwise Fst

Pairwise.Fit : A matrix of real numbers estimating the pairwise Fit

_A_u_t_h_o_r(_s):

     Arnaud Estoup for original code in Turbo Pascal.

     Translation in Fortran and interface with R by Gilles Guillot

_R_e_f_e_r_e_n_c_e_s:

     Weir, B.S. and C.C. Cockerham,  Estimating F-statistics for the
     analysis of population structure, Evolution, 1984, vol. 38,
     1358-1370.

