This is cutadapt 4.1 with Python 3.8.13 Command line parameters: --cores 16 --match-read-wildcards --overlap 3 --error-rate 0.1 -g GTGYCAGCMGCCGCGGTAA -o /nephele_data/outputs/cutadapt_trimmed/R22-13_S20_L001_R1_001.fastq.gz /nephele_data/inputs/R22-13_S20_L001_R1_001.fastq Processing single-end reads on 16 cores ... Finished in 0.21 s (5 µs/read; 11.52 M reads/minute). === Summary === Total reads processed: 40,322 Reads with adapters: 39,986 (99.2%) Reads written (passing filters): 40,322 (100.0%) Total basepairs processed: 12,096,600 bp Total written (filtered): 11,336,944 bp (93.7%) === Adapter 1 === Sequence: GTGYCAGCMGCCGCGGTAA; Type: regular 5'; Length: 19; Trimmed: 39986 times Minimum overlap: 3 No. of allowed errors: 1-9 bp: 0; 10-19 bp: 1 Overview of removed sequences length count expect max.err error counts 13 1 0.0 1 1 16 1 0.0 1 1 18 123 0.0 1 11 112 19 39807 0.0 1 37935 1872 20 54 0.0 1 7 47