This is cutadapt 4.1 with Python 3.8.13 Command line parameters: --cores 16 --match-read-wildcards --overlap 3 --error-rate 0.1 -g GTGYCAGCMGCCGCGGTAA -o /nephele_data/outputs/cutadapt_trimmed/R22-56_S5_L001_R1_001.fastq.gz /nephele_data/inputs/R22-56_S5_L001_R1_001.fastq Processing single-end reads on 16 cores ... Finished in 0.32 s (6 µs/read; 9.69 M reads/minute). === Summary === Total reads processed: 51,268 Reads with adapters: 50,857 (99.2%) Reads written (passing filters): 51,268 (100.0%) Total basepairs processed: 15,380,400 bp Total written (filtered): 14,414,216 bp (93.7%) === Adapter 1 === Sequence: GTGYCAGCMGCCGCGGTAA; Type: regular 5'; Length: 19; Trimmed: 50857 times Minimum overlap: 3 No. of allowed errors: 1-9 bp: 0; 10-19 bp: 1 Overview of removed sequences length count expect max.err error counts 12 1 0.0 1 1 15 1 0.0 1 1 17 5 0.0 1 4 1 18 144 0.0 1 24 120 19 50640 0.0 1 48194 2446 20 66 0.0 1 3 63