This is cutadapt 4.1 with Python 3.8.13 Command line parameters: --cores 16 --match-read-wildcards --overlap 3 --error-rate 0.1 -g GTGYCAGCMGCCGCGGTAA -o /nephele_data/outputs/cutadapt_trimmed/R22-61_S3_L001_R1_001.fastq.gz /nephele_data/inputs/R22-61_S3_L001_R1_001.fastq Processing single-end reads on 16 cores ... Finished in 0.28 s (5 µs/read; 11.48 M reads/minute). === Summary === Total reads processed: 54,416 Reads with adapters: 53,682 (98.7%) Reads written (passing filters): 54,416 (100.0%) Total basepairs processed: 16,324,800 bp Total written (filtered): 15,304,988 bp (93.8%) === Adapter 1 === Sequence: GTGYCAGCMGCCGCGGTAA; Type: regular 5'; Length: 19; Trimmed: 53682 times Minimum overlap: 3 No. of allowed errors: 1-9 bp: 0; 10-19 bp: 1 Overview of removed sequences length count expect max.err error counts 10 1 0.1 1 0 1 12 2 0.0 1 2 16 1 0.0 1 0 1 17 9 0.0 1 7 2 18 181 0.0 1 31 150 19 53409 0.0 1 49959 3450 20 79 0.0 1 10 69