This is cutadapt 4.1 with Python 3.8.13 Command line parameters: --cores 16 --match-read-wildcards --overlap 3 --error-rate 0.1 -g GTGYCAGCMGCCGCGGTAA -o /nephele_data/outputs/cutadapt_trimmed/zebra-110_S134_L001_R1_001.fastq.gz /nephele_data/inputs/zebra-110_S134_L001_R1_001.fastq Processing single-end reads on 16 cores ... Finished in 0.08 s (15 µs/read; 3.97 M reads/minute). === Summary === Total reads processed: 5,613 Reads with adapters: 5,556 (99.0%) Reads written (passing filters): 5,613 (100.0%) Total basepairs processed: 1,683,900 bp Total written (filtered): 1,578,338 bp (93.7%) === Adapter 1 === Sequence: GTGYCAGCMGCCGCGGTAA; Type: regular 5'; Length: 19; Trimmed: 5556 times Minimum overlap: 3 No. of allowed errors: 1-9 bp: 0; 10-19 bp: 1 Overview of removed sequences length count expect max.err error counts 18 15 0.0 1 7 8 19 5528 0.0 1 5242 286 20 13 0.0 1 2 11