This is cutadapt 4.1 with Python 3.8.13 Command line parameters: --cores 16 --match-read-wildcards --overlap 3 --error-rate 0.1 -g GTGYCAGCMGCCGCGGTAA -o /nephele_data/outputs/cutadapt_trimmed/zebra-118_S142_L001_R1_001.fastq.gz /nephele_data/inputs/zebra-118_S142_L001_R1_001.fastq Processing single-end reads on 16 cores ... Finished in 0.11 s (10 µs/read; 5.87 M reads/minute). === Summary === Total reads processed: 10,931 Reads with adapters: 10,821 (99.0%) Reads written (passing filters): 10,931 (100.0%) Total basepairs processed: 3,279,300 bp Total written (filtered): 3,073,751 bp (93.7%) === Adapter 1 === Sequence: GTGYCAGCMGCCGCGGTAA; Type: regular 5'; Length: 19; Trimmed: 10821 times Minimum overlap: 3 No. of allowed errors: 1-9 bp: 0; 10-19 bp: 1 Overview of removed sequences length count expect max.err error counts 9 2 0.0 0 2 13 2 0.0 1 2 16 2 0.0 1 0 2 17 1 0.0 1 1 18 38 0.0 1 4 34 19 10748 0.0 1 10047 701 20 28 0.0 1 3 25