This is cutadapt 4.1 with Python 3.8.13 Command line parameters: --cores 16 --match-read-wildcards --overlap 3 --error-rate 0.1 -g GTGYCAGCMGCCGCGGTAA -o /nephele_data/outputs/cutadapt_trimmed/zebra-176_S200_L001_R1_001.fastq.gz /nephele_data/inputs/zebra-176_S200_L001_R1_001.fastq Processing single-end reads on 16 cores ... Finished in 0.05 s (17 µs/read; 3.44 M reads/minute). === Summary === Total reads processed: 2,586 Reads with adapters: 2,558 (98.9%) Reads written (passing filters): 2,586 (100.0%) Total basepairs processed: 775,800 bp Total written (filtered): 727,205 bp (93.7%) === Adapter 1 === Sequence: GTGYCAGCMGCCGCGGTAA; Type: regular 5'; Length: 19; Trimmed: 2558 times Minimum overlap: 3 No. of allowed errors: 1-9 bp: 0; 10-19 bp: 1 Overview of removed sequences length count expect max.err error counts 18 10 0.0 1 3 7 19 2545 0.0 1 2404 141 20 3 0.0 1 1 2