FastQCFastQC Report
Wed 30 Nov 2022
4061-JW37trimB_R2.fq

Summary

[OK]Basic Statistics

MeasureValue
Filename4061-JW37trimB_R2.fq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences196
Sequences flagged as poor quality0
Sequence length236
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCTTTCCCTACCCGGGTATCTAATCTGTCTCTTATACACATCTGACGC2110.714285714285714No Hit
ACTCTTTCCCTACACGGGTATCTAATCTGTCTCTTATACACATCTGACGC168.16326530612245No Hit
ACTCTTTCCCTACGCGGGTATCTAATCTGTCTCTTATACACATCTGACGC73.571428571428571No Hit
CTCTTTCCCTACACGGGTATCTAATCTGTCTCTTATACACATCTGACGCT73.571428571428571No Hit
CTCTTTCCCTACCCGGGTATCTAATCTGTCTCTTATACACATCTGACGCT63.061224489795918No Hit
CTCTTTCACTACACGGGTATCTAATCTGTCTCTTATACACATCTGACGCT63.061224489795918No Hit
TCTTTCCCTACCGGGGTATCTAATCTGTCTCTTATACACATCTGACGCTG63.061224489795918No Hit
ACTCTTTCCCTACAGGGGTATCTAATCTGTCTCTTATACACATCTGACGC52.5510204081632653No Hit
ACTCTTTCCCTACCGGGGTATCTAATCTGTCTCTTATACACATCTGACGC52.5510204081632653No Hit
CTTTCCCTACACGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGC52.5510204081632653No Hit
CCTACACGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGACG31.530612244897959No Hit
TCCCTACGCGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGA31.530612244897959No Hit
ACTCTTCCCTACCCGGGTATCTAATCTGTCTCTTATACACATCTGACGCT31.530612244897959No Hit
ACACGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGACGACT31.530612244897959No Hit
TCTTTCCCTACGCGGGTATCTAATCTGTCTCTTATACACATCTGACGCTG31.530612244897959No Hit
TCTTTCCCTACCCGGGTATCTAATCTGTCTCTTATACACATCTGACGCTG31.530612244897959No Hit
TTCCCTACACGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCG31.530612244897959No Hit
TCCCTACACGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGA31.530612244897959No Hit
CTTTCCCTACGCGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGC21.0204081632653061No Hit
TCTTTCCCTACAGGGGTATCTAATCTGTCTCTTATACACATCTGACGCTG21.0204081632653061No Hit
ACGGGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGACGACT21.0204081632653061No Hit
ACTCTTTCCCTACGGGGGTATCTAATCTGTCTCTTATACACATCTGACGC21.0204081632653061No Hit
ACTCTTTCACTACACGGGTATCTAATCTGTCTCTTATACACATCTGACGC21.0204081632653061No Hit
ACGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGACGACTTA21.0204081632653061No Hit
CTACGCGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGACGA21.0204081632653061No Hit
TCTTTCCCTACACGGGTATCTAATCTGTCTCTTATACACATCTGACGCTG21.0204081632653061No Hit
TTCCCTACGCGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCG21.0204081632653061No Hit
CTACCCGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGACGA21.0204081632653061No Hit
TCCCTACCCGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGA21.0204081632653061No Hit
ACCCGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGACGACT10.5102040816326531No Hit
CTTTCCCTACGGGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGC10.5102040816326531No Hit
TACACGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGACGCC10.5102040816326531No Hit
ATGATACGGCGACTACGGGGGTATCTAATCTGTCTCTTATACACATCTGA10.5102040816326531No Hit
CTTTCCCTACCCGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGC10.5102040816326531No Hit
ACTCTGTACCTACCCGGGGATCTAATCTGTCTCTTATACACATCTGACGC10.5102040816326531No Hit
CTCTTCCCTACGCGGGTATCTAATCTGTCTCTTATACACATCTGACGCTG10.5102040816326531No Hit
ACAGGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGACGACT10.5102040816326531No Hit
TTACCTACCCGGGTATCTAATCTGTCTCTTATAAACATCTGACGCTGCCG10.5102040816326531No Hit
TTCCCTACAGGGATATCTAATCTGTCTCTTATACACATCTGACGCTGCCG10.5102040816326531No Hit
TTTCCCTACACGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCC10.5102040816326531No Hit
TCTCTTTCCCTACGCGGCTATCTCATCTGTCTCTTATACACATCTGACGC10.5102040816326531No Hit
CTCTTTCCCTACGGGGGTATCTAGTCTGTCTCTTATACACATCTGACGCT10.5102040816326531No Hit
CACTACCGGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGAC10.5102040816326531No Hit
CTTTCACTACCGGGGTATCTACTCTGTCTCTTATACACATCTGACGCTGC10.5102040816326531No Hit
ACTCTTTCCTACAGGGGTATCTAATCTGTCTCTTATACACATCTGACGCT10.5102040816326531No Hit
TTCCTACCCGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGA10.5102040816326531No Hit
TACACCATACGGGTAGCCAATCTCTCTCTTATACACATCTGACACTGTCG10.5102040816326531No Hit
ACTCTTTCCCTACACGGGTATCTGATCTGTCTCTTATACACATCTGACGC10.5102040816326531No Hit
TCTTTCCCTACACGGGTATCTAATCTGTGTCTTATACACATCTGACGCTG10.5102040816326531No Hit
GCTCTTTCCCTACCCGGGGATCTAATCTGTCTCTTCTACACATCTGACGC10.5102040816326531No Hit
CTCTTTCCCTACACGGGTATCTAGTCTGTCTCTTATACACATCTGACGCT10.5102040816326531No Hit
GACGCTGCCGACGAGGACTACGGGGGGATCTAATCTGTCTCTTATACACA10.5102040816326531No Hit
ACTCTTTCCCTACACGGGTATCTAATCTGTCTCTTATACACATCTGACTC10.5102040816326531No Hit
CTTTCCTACCCGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCC10.5102040816326531No Hit
TCTTTCTCTACACGGGTCTCTACTCTGCGTCTTATACACATCTGACGCTG10.5102040816326531No Hit
ACTCTTTCCCCACCCGGGTATCTAATTTGTCTCTTATACACATCTGACGC10.5102040816326531No Hit
TTCCCTACACGGGTATCTAATATGTCTCTATAAATCTTTTGACACTACCA10.5102040816326531No Hit
ACCTTTCCCTACGCGGGTATCTAATCTGTCTCTTATACACATCTGACGCT10.5102040816326531No Hit
TACTCCGCGCCGCACCGCACGCTTTTGTGCCTGGGATTCTTTCCGCATCC10.5102040816326531No Hit
CTACCCGGGCATATACACTCTCTCTTACACAAATCTTACGCACCCGATCA10.5102040816326531No Hit
CTCTTTCCCTACACGGGTATCTAATCTGGCTCTTATACACATCTTACGCT10.5102040816326531No Hit
CTACACGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGACGA10.5102040816326531No Hit
ACCGGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCTGACGACT10.5102040816326531No Hit
CTTTCCCTACCCGGGTATCTAATCTGTCTCTTATACACATCTGCCGCTGC10.5102040816326531No Hit
TCACTACAGGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGA10.5102040816326531No Hit
AAGCAGAAGACGGCATACGAGATTCGCTATAAGTCATTCATCCGGACTAC10.5102040816326531Illumina PCR Primer Index 4 (96% over 26bp)
CTTTTCACTACAGGGGTATCTAATCTGTCTCTTATACACATCTGACGCTG10.5102040816326531No Hit
CTCTTCCCCCACAAGGGCATCTAATCTGTCTCTTATACACATCTGACGCT10.5102040816326531No Hit
CACTACCCGGGGATCTAATCTGTCTCTTATACACATCTGACGCTGCCGAC10.5102040816326531No Hit
TTCCCTACCCGGGTATCTAATCTGCCTCTTATACACATCTGTCGCTGCCG10.5102040816326531No Hit
TTCCCTCCCCGGCTATCTAAGCTTTCGCGTATAAACATCTGACTCAGCCG10.5102040816326531No Hit
ACTCTTTCACTACCCGGGTATCTAATCTGTCTCTTATACACATCTGACGC10.5102040816326531No Hit
CTTTCACTACCCGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGC10.5102040816326531No Hit
TTCCCTACCCGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCG10.5102040816326531No Hit
CTCTTTCCCTACCCGGGTATCTAATCTGTCTCTTATACACATCTTACGCT10.5102040816326531No Hit
CTCTTCCCTACCGGGGTATCTAATCTGTCTCTTATACACATCTGACGCTG10.5102040816326531No Hit
CTCTTTCCCTACCGGGGTATCTAATCTGTCTCTTATACACATCTGACGCT10.5102040816326531No Hit
TACCCGGGCATCTAATCTGTCTCTTATACACATCTGACGCTGCCGACGCC10.5102040816326531No Hit
GACTACAGGGGGATCTAATCTGTCTCTTATACACATCTGACGCTGCCGAC10.5102040816326531No Hit
ACTCTCTCCCGACCCGGGGATCTAATCTGTCTCTTATACACCTCTGACTC10.5102040816326531No Hit
CCTACACGGGTATCTCATCTGTCTCTTATACACATCTGACGCTGCCGACG10.5102040816326531No Hit
CTACCGGACTACACGGGTATCTAATCTGTCTCTTATACACATCTGACGCT10.5102040816326531No Hit
TTCCCTACCGGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCG10.5102040816326531No Hit
ACTCTCCCTACGCGGGTATCTAATCTGTCTCTTATACACATCTGACGCTG10.5102040816326531No Hit
TCCCTACCGGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGA10.5102040816326531No Hit
CTCTTTCCCTACAGGGGTATCTAATCTGTCTCTTATACACATCTGACGCT10.5102040816326531No Hit
ATCAGGGCGATGGCCCACTACCCGGGTATCTAATCTGTCTCTTATACACA10.5102040816326531No Hit
GACTACGGGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGAC10.5102040816326531No Hit
ACTCTTTCCCTACACTACGCGGGTATCTAATCTGTCTCTTATACACATCT10.5102040816326531No Hit
GTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGACGACTTATCGA10.5102040816326531No Hit
ACTCTTTCCCTACACGGGTATCTAATCTGTCTCTTCTACACATCTGACGC10.5102040816326531No Hit
CACTCCCCGTGTATCTAATCTGGCTCTTATACACATCTGACGCGGCCGAC10.5102040816326531No Hit
ACCGGGGTATCTAATCTGTCTCTTATACACATCTGACGCTGCCGACGACT10.5102040816326531No Hit
ACTCTTTCCCTACCCGGGTATCTGATCTGTCTCTTATACACATCTGACGC10.5102040816326531No Hit
TTCCCCACCGGGGAGTCTAATATGTCTCTTATACACTTCTGACGCTGTCG10.5102040816326531No Hit

[FAIL]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers